nnUNet: Improper Neutralization of Special Elements in Output Used by a Downstream Component
CVE-2026-44246 is a high-severity improper neutralization of special elements in output used by a downstream component vulnerability in nnUNet from MIC-DKFZ, with a CVSS 3.1 base score of 7.2 out of 10. It can be exploited remotely over the network by an unauthenticated attacker, without any action from a user. Affected nnUNet versions: < 2.4.1. The record does not name a fixed version, so check the vendor advisory. There is no confirmed exploitation so far. EPSS estimates a 0.29% chance of exploitation within 30 days, which is low compared with other CVEs.
High severity with no evidence of exploitation so far.
What to do
- Update Nnu-net to 2.4.1 or a later version.
- Read the advisory on github.com for workarounds and exact fixed builds.
- Until you can update, restrict network access to the affected service so it is not reachable from untrusted networks.
Affected products and versions
Version data comes from the organisation that assigned the CVE. Confirm against the vendor advisory before deciding you are unaffected.
How the severity score breaks down
- Attack vector
- NetworkCan be exploited remotely over a network, including the internet.
- Attack complexity
- LowNo special conditions are needed; the attack works reliably.
- Privileges required
- NoneNo account or login is needed.
- User interaction
- NoneNo action by a victim is required.
- Scope
- ChangedThe attack can reach beyond the vulnerable component into other systems.
- Confidentiality
- LowSome restricted data can be read.
- Integrity
- LowLimited modification of data is possible.
- Availability
- NoneAvailability is not affected.
Vector: CVSS:3.1/AV:N/AC:L/PR:N/UI:N/S:C/C:L/I:L/A:N. Scored by CNA (github.com).
Official description
nnU-Net is a semantic segmentation framework that automatically adapts its pipeline to a dataset. Prior to 2.4.1, the nnU-Net Issue Triage workflow in .github/workflows/issue-triage.yml is vulnerable to Agentic Workflow Injection. The workflow sets allowed_non_write_users: ${{ github.event.issue.user.login }}, which means any logged-in GitHub user who opens an issue can reach this agentic workflow with attacker-controlled content. Untrusted issue title and body content are embedded directly into the prompt of anthropics/claude-code-action, and the workflow then runs a command-capable Claude agent with permission to comment on and relabel the current issue via gh. Because this workflow is triggered automatically on issues.opened, an external attacker can submit a crafted issue that steers the agent beyond its intended issue-triage purpose and influences authenticated issue actions. This vulnerability is fixed in 2.4.1.
Source: the CVE record as published by its numbering authority, via NVD and CVE.org.
The underlying weakness: Improper Neutralization of Special Elements in Output Used by a Downstream Component
The product constructs all or part of a command, data structure, or record using externally-influenced input from an upstream component, but it does not neutralize or incorrectly neutralizes special elements that could modify how it is parsed or interpreted when it is sent to a downstream component.
How developers prevent this class of flaw
- Programming languages and supporting technologies might be chosen which are not subject to these issues.
- Utilize an appropriate mix of allowlist and denylist parsing to filter control-plane syntax from all input.
Timeline
- CVE record published.
- CISA published its SSVC assessment (exploitation: poc, automatable: yes, technical impact: partial).
- Record last changed materially (score, affected products, status or references).
References
Advisories
- github.com/MIC-DKFZ/nnUNet/security/advisories/GHSA-63mx-j37w-gh59Exploit, Mitigation
Recent Improper Neutralization of Special Elements in Output Used by a Downstream Component vulnerabilities
- 8.8 High severity
- 8.2 High severity
- 8.8 High severity
- 8.8 High severity
- 8.8 High severity
- 7.5 High severity
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